updated 13 hours ago by
GenoMax
142k
•
written 3 days ago by
hophuquy0944
•
0
1
vote
16
replies
723
views
1
vote
8
replies
446
views
updated 23 hours ago by
Alex Reynolds
35k
•
written 5 days ago by
ntsopoul
▴
60
0
votes
7
replies
4.3k
views
updated 23 hours ago by
aidangcruickshank
▴
10
•
written 3.7 years ago by
rthapa
▴
90
0
votes
5
replies
292
views
0
votes
4
replies
292
views
updated 18 hours ago by
txema.heredia
▴
130
•
written 2 days ago by
Ngrin
•
0
0
votes
4
replies
275
views
19 hours ago by
mavy
▴
10
1
vote
4
replies
311
views
1
vote
2
replies
589
views
updated just now by
Muhammad
•
0
•
written 2.6 years ago by
mari.johnson
•
0
0
votes
2
replies
289
views
updated 5 hours ago by
anton.i.petrov
•
0
•
written 3 months ago by
Larissa
•
0
1
vote
1
reply
142
views
0
votes
1
reply
98
views
1
vote
1
reply
244
views
2
votes
1
reply
164
views
updated 4 hours ago by
Gordon Smyth
★
7.2k
•
written 1 day ago by
marineandriot
•
0
0
votes
0
replies
56
views
updated 10 hours ago by
Pierre Lindenbaum
161k
•
written 11 hours ago by
Mohamed Samir
▴
20
0
votes
0
replies
69
views
14 hours ago by
Moinuddin
•
0
Recent Votes
Recent Locations •
All
United Arab Emirates, 13 minutes ago
United States, 18 minutes ago
Hong Kong, 18 minutes ago
Australia, 20 minutes ago
Turkey, 28 minutes ago
USA, 32 minutes ago
United States, 36 minutes ago
Recent Awards •
All
Popular Question to
Muhammad
•
0
Popular Question to
synat.keam
▴
100
Popular Question to
syedahamdani94
•
0
Popular Question to
mohammadhassanj
▴
260
Popular Question to
finswimmer
16k
Recent Replies
Comment: Error in CIBERSORTx ($ operator is invalid for atomic vectors)
by
nguyenn6
•
0
did you ever figure it out? i'm having the same issue.
Comment: Traveler with Infernal mapping failed
by
anton.i.petrov
•
0
Hi Larissa! I am the lead developer of R2DT and I've just noticed this question. Could you please email help@r2dt.bio with your input seque…
Comment: constructing pangenome through psvcp
by
analyst
▴
50
Fixed the issue by updating nucmer version.
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
GenoMax
142k
Can you create a small test database (`makeblastdb`) from your query file and try to run the search against the same file and see if that w…
Comment: calculating genomic coverage/ base overlap in R
by
1769mkc
★
1.2k
you can `dput(head(df)` for the both the data frame so that other can test for possible solutions
Comment: Help with Biopython for Beginner
by
Joe
21k
One question before offering more solutions: are you trying to learn Python with this as an example problem, or are you trying to find the …
Answer: RNAseq coverage vs depth for transcript isoform expression?
by
Gordon Smyth
★
7.2k
See the exploration of isoform estimation precision vs read length and sequencing depth in our paper: https://doi.org/10.1093/nar/gkad1167.…
Comment: How to handle duplicated genes in TCGA data?
by
txema.heredia
▴
130
Why does the tool require gene symbols and not ensembl ids? Is it retrieving information from somewhere else? If so, your best bet is to fi…
Comment: how to treat the replicates while performing WGCNA
by
mavy
▴
10
Thank you so much for your response . Really appreciate it.
I will try the way you mentioned and will get back if I have any query
Comment: Blastn error : ncbi::CObject::ThrowNullPointerException() - Attempt to access NU
by
hophuquy0944
•
0
i have the same error, i used high performance computer, here is my code to set memory.
srun --nodes=1 --ntasks=1 --cpus-per-task=24 -…
Comment: Overlapping Ranges within Granges object
by
Alex Reynolds
35k
Yes, `bedmap` will perform operations on one or two BED files.
Comment: B allele frequency (BAF)
by
aidangcruickshank
▴
10
Apologies for resurrecting this post, but any idea what that functions "regions" paramater takes? Would it be a GRanges object? The documen…
Comment: How to handle duplicated genes in TCGA data?
by
Ngrin
•
0
Thanks @txema.heredia.The tool I am going to use only accepts gene symbols. This is the reason. So I cannot use ENS IDs.
Answer: Design for complex RNA-Seq experiment using Deseq2
by
swbarnes2
14k
This is a rather small experiment, I don't know that you can establish a meaningful baseline for each patient with a single pre sample, and…
Traffic: 1033 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6