5 weeks ago by
bioinfo_enthusiast
•
0
4
votes
6
replies
599
views
1
vote
2
replies
522
views
21
votes
12
replies
1.2k
views
7 follow
Forum:
Reproducibility Crisis
6
votes
13
replies
7.9k
views
7 follow
0
votes
3
replies
427
views
2
votes
2
replies
402
views
1
vote
5
replies
1.4k
views
updated 11 weeks ago by
zhbyrd
•
0
•
written 10 months ago by
Mr. George
▴
10
2
votes
2
replies
411
views
3
votes
5
replies
620
views
updated 5 weeks ago by
LauferVA
4.7k
•
written 6 weeks ago by
bioinfo1990
▴
10
2
votes
3
replies
537
views
4
votes
4
replies
499
views
2
votes
2
replies
504
views
updated 5 weeks ago by
Ram
45k
•
written 6 weeks ago by
ahmad79rezahay
•
0
0
votes
0
replies
237
views
6 weeks ago by
Physalia-courses
★
2.6k
4
votes
8
replies
810
views
6
votes
5
replies
509
views
13
votes
6
replies
6.4k
views
0
votes
3
replies
341
views
0
votes
2
replies
331
views
4
votes
10
replies
884
views
5 weeks ago by
barslmn
★
2.4k
0
votes
2
replies
327
views
0
votes
0
replies
349
views
7
votes
6
replies
771
views
3
votes
4
replies
526
views
1
vote
4
replies
554
views
4
votes
4
replies
508
views
0
votes
2
replies
389
views
updated 5 weeks ago by
Zhenyu Zhang
★
1.3k
•
written 6 weeks ago by
umarfaruksahin
•
0
0
votes
0
replies
1.4k
views
0
votes
0
replies
233
views
6 weeks ago by
anna.utili
•
0
1
vote
2
replies
418
views
5 weeks ago by
Davor
•
0
2
votes
4
replies
585
views
4
votes
3
replies
568
views
updated 6 weeks ago by
jared.andrews07
★
18k
•
written 6 weeks ago by
Oli
•
0
3
votes
1
reply
324
views
updated 6 weeks ago by
Marcellie87
▴
10
•
written 6 weeks ago by
Steven
▴
50
0
votes
0
replies
222
views
4
votes
4
replies
2.0k
views
4
votes
0
replies
321
views
6 weeks ago by
Matthias Zepper
5.1k
0
votes
3
replies
442
views
1
vote
1
reply
332
views
updated 6 weeks ago by
ATpoint
88k
•
written 6 weeks ago by
mark.pekarsky
▴
20
1
vote
2
replies
456
views
0
votes
1
reply
326
views
updated 5 weeks ago by
mark.ziemann
★
2.0k
•
written 6 weeks ago by
mark.pekarsky
▴
20
0
votes
0
replies
215
views
0
votes
2
replies
374
views
1
vote
5
replies
576
views
updated 6 weeks ago by
Pierre Lindenbaum
166k
•
written 6 weeks ago by
Leane
•
0
0
votes
3
replies
435
views
4
votes
4
replies
597
views
0
votes
1
reply
321
views
2
votes
5
replies
4.4k
views
updated 6 weeks ago by
Pierre Lindenbaum
166k
•
written 7.8 years ago by
William
★
5.3k
0
votes
0
replies
235
views
0
votes
3
replies
583
views
3
votes
3
replies
1.3k
views
updated 5 weeks ago by
bioinfo_enthusiast
•
0
•
written 3.9 years ago by
Kumar
▴
120
0
votes
0
replies
243
views
updated 6 weeks ago by
Ram
45k
•
written 6 weeks ago by
aiswaryabioinfo
▴
30
Recent Votes
Recent Locations •
All
France, 2 minutes ago
Ramat Gan, 2 minutes ago
Austria/Vienna, 3 minutes ago
Norway, 8 minutes ago
USA, 14 minutes ago
Italy, 14 minutes ago
India, 14 minutes ago
Recent Awards •
All
Popular Question to
Nona
▴
90
Popular Question to
enee
▴
20
Popular Question to
genetixs
▴
20
Popular Question to
Basti
★
2.1k
Scholar to
Pierre Lindenbaum
166k
Popular Question to
SomeOne
▴
170
Popular Question to
wonde2000
•
0
Recent Replies
Comment: What are BED files?
by
ATpoint
88k
The first and post important skill for a bioinformatician (or scientist in general) is to find available information online. This can be go…
Answer: What are BED files?
by
Pierre Lindenbaum
166k
BED format https://genome.ucsc.edu/FAQ/FAQformat.html#format1
Comment: Minimum number of samples for multi-omics data integration
by
manaswwm
▴
560
If your analysis is aimed at comparing two groups (eg: treatment conditions), then you should probably have a look at power calculations to…
Answer: Editing and Adding to a GTF file
by
Juke34
9.2k
To add functional information (name or function) do not use attributes used to structure the file ( gene_id/ transcript_id for GTF and ID/P…
Comment: Warning in bcftools when subsetting a VCF by variant ID
by
Pierre Lindenbaum
166k
cross-posted: https://bioinformatics.stackexchange.com/questions/23393/
Comment: Sample level genotype mapping in plink vcf output
by
Pierre Lindenbaum
166k
0 : REF
1: first ALT
2: second ALT
3 : third ALT
etc...
Comment: Sample level genotype mapping in plink vcf output
by
1769mkc
★
1.3k
It works, how does this convert the binary to actual genotype?
Comment: Transcript identification and quantification
by
dsull
★
7.5k
AH perfect!! Thanks -- that's exactly right!
Here's the updated command (and links) for v3:
pip install kb_python
wget https://ra…
Comment: Gene Exons Painter
by
Mensur Dlakic
★
29k
I am really not picking up on you - really. It just strikes me that if you want to get people to use your tools, a little bit more effort i…
Answer: Assigning a string variable on Visual Studio using python
by
GenoMax
151k
Not sure what you are trying to do here. How are the two lines you wrote above connected? You can't have a space in python variable names, …
Comment: Transcript identification and quantification
by
GenoMax
151k
There are some barcodes provided here --> https://github.com/mortazavilab/parse_pipeline/tree/main/barcodes
Perhaps @dsull knows if there…
Comment: Ggplot make boxplots more wide
by
zx8754
12k
Set colour to Day as well:
```R
ggplot( data = metadata, aes(x = location, y = gene, fill = Day, colour = Day)) + geom_boxplot()
```
To …
Comment: Transcript identification and quantification
by
dsull
★
7.5k
Ooh, that's a bit tricky. I worked with v3 of the kit a while back but for some reason I can only find the R2/R3 barcodes. I'll let you kno…
Comment: The Biostar Herald for Monday, May 05, 2025
by
cmdcolin
★
4.2k
BinSeq format from ArcInstitute also ! https://github.com/ArcInstitute/binseq ...the trio of binseq+xsra+https://github.com/ArcInstitute/SR…
Traffic: 2364 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6