Entering edit mode
10.6 years ago
Ram
44k
Hi,
I apologize if the question is too basic.
I am working on a bunch of known human SNPs, and I was wondering if there was any way to study if these SNPs are linked and might occur on the same haplotype in a non-random frequency. Is this type of study called Linkage Disequilibrium? How do I perform such a study, and am I missing data points?
Any help and/or pointers on this would really help me. Thank you in advance for your response.
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Ram
Thank you, Sukhdeep. That is an amazing resource. Just wondering - I just have a bunch of known rs#, would I need to find the VCF files as well?
what is rs#
SNP identifier from dbSNP.
Sorry, I don't know about that.
It's OK, Sukhdeep. The link you gave me will help me get started on my search. Thank you so much for the pointer!