News:GATB will provide developer support via Biostar
0
9
Entering edit mode
10.5 years ago
Rayan Chikhi ★ 1.5k

The Genome Assembly & Analysis Tool Box (GATB) provides an easy way to develop efficient and fast NGS tools. GATB is a C++ library of high level functions that leverage state-of-the-art data structures for handling huge NGS datasets.

To developers of NGS applications: GATB allows you to re-use components (fasta/fastq reading, k-mer counting, de Bruijn graph construction and traversal, minimizers) from Minia/DSK. It's well-documented.

We will answer Biostar questions regarding:

  • Library usage
  • Bugs
  • Feedback
  • Support for any of the tools

Post a question

See all posts

-- GATB authors

minia dsk gatb • 4.3k views
ADD COMMENT
2
Entering edit mode

That's really great, glad to see it.

ADD REPLY

Login before adding your answer.

Traffic: 2012 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6