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10.5 years ago
yangyongzhi2008
▴
40
Hello everyone,
I want to estimate the divergence time between species by the mcmctree in the paml software. I have read the tutorials. But I still have some questions.
1. The input data is codon sequences, 4-fold degeneration sites or 1st/2nd codon sites?
2. How to set the sigma2_gamma parameter.
Thank you!