Gene Co-expression Tools

Question

[Maria]

Hello all,

Can anyone suggest any gene co-expression tools out there. Also can I use gene co-expression in Matlab, I can't seem to find any tutorials online. Advice are greatly appreciated.

Good Day

[Maria]

Thanks all for the responses.

Answer 1

[Sam]

I am not familiar with Matlab, but if you are trying to perform gene co-expression network analysis, you can try WGCNA from R.

Answer 2

[Cytosine]

This has been discussed before on Biostars:

Any Tutorial For Co-Expression(Network) Analysis?

I'm not sure about Matlab, but R has some good packages to do the co-expression analysis (WGCNA for one).