Entering edit mode
10.2 years ago
Saad Khan
▴
440
Hi I am trying to use ggbio with R. I am using GRCH37 assembly for my work. In ggbio there is a function called Ideogram.
I would like to use it with GRCH37. The assembly is not available in bioconductor packages usually you can use hg19 just like this.
p.ideo <- Ideogram(genome = "hg19")
I am wondering how can I make it work with GRCH37?
Aren't hg19 and GRCH37 the same release, only that chromosomes are called slightly different? Hg19 Versus Grch37
Yep GRCh37 and hg19 are confusingly the same release.