Getting Haplotype data from 1000 genome project

Question

[muralinmars]

Hi all,

Is there any way of getting just the haplotype data of particular population from 1000 genome project.

Thanks in advance for the response.

Answer 1

[smilefreak]

Hi Murialinmars.

The 1000 genomes project provides phased vcfs, so you should be able to extract each haplotype from the VCF files. To obtain the particular population bcftools can be used to extract a particular population from these files.