Entering edit mode
10.1 years ago
Cacau
▴
520
It seems that the third line of a sequence in a fastq formatted file may not matter. Could I just keep a '+' for Line 3?
It seems that the third line of a sequence in a fastq formatted file may not matter. Could I just keep a '+' for Line 3?
Yes, you can, and in fact I would say you should remove the optional redundant information from the plus line. This is recommended to save space http://dx.doi.org/10.1093/nar/gkp1137
Yes you can do that to reduce the size of file.
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Do not delete 3rd line in fastq file, because most (all) of the tools accepts standard format i.e four lines for each record
Thanks! So to keep a '+' is OK for Line 3?
Yes, you just need the plus sign, the remainder isn't needed.
Thanks a lot!