Track Ensembl Changes by Species
1
0
Entering edit mode
10.1 years ago
pld 5.1k

I'm looking for a gene in a species hosted on the Ensembl website, it was previously there but searching for it now doesn't turn up anything. Is there any way to check if I'm just missing it, or if the annotation/gene is now gone?

ensembl • 1.9k views
ADD COMMENT
0
Entering edit mode

which gene and species is that ?

ADD REPLY
0
Entering edit mode

In general.

ADD REPLY
0
Entering edit mode

In general, its quite interesting. I am curious to know the answers too :)

ADD REPLY
0
Entering edit mode

Are you searching the same reference build that you used to identify the gene in the first place?

ADD REPLY
0
Entering edit mode

That is sort of the question that I'm asking, if a new build of a species drops a gene, how do I tell if the search by name tool isn't working, or if they've actually dropped it.

ADD REPLY
0
Entering edit mode
10.1 years ago
Emily 24k

If you've got the Ensembl ID you can quickly find it with www.ensembl.org/id/ENS####

ADD COMMENT
0
Entering edit mode

I ended up finding it, but I had to search for that gene in another related species, then enter the homology tree and get to my target gene from there. I'm not sure why, but not matter the term I use (HGNC symbol, alt symbols, full name) it won't show up in my species of interest.

ADD REPLY

Login before adding your answer.

Traffic: 1518 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6