Any tools to predict non-coding driver mutations

Question

[Ming Tommy Tang]

Hi,

I am looking for a tool to predict functional mutations in non-coding region to drive cancer progression.

Do you know any tools/software? Most tools I see are for protein-coding regions.

Thank you.

[Christian]

See related post at Program to prioritize silent SNVs?

Answer 1

[Charles Warden]

I've used FunSeq. I'm not sure it if really the best, but I think it gave non-random enrichment. Also, there is a FunSeq2, which I haven't tried.

[Ming Tommy Tang]

I have heard about it, will try it out! Thanks