Geo: Finding Up- And Down-Regulated Genes In Gds Records

0

Entering edit mode

13.3 years ago

Avoks ▴ 140

Hi,

I don’t even know if this is remotely possible but I just thought I should take a chance.On the GDS record pages in GEO, there is an analysis tools button. Clicking on this gives the option of finding genes that are up/down for the condition in the dataset, I believe.The result however does not indicate which is up- or down-regulated...at least I can’t seem to find where it shows that. Is it possible to somehow retrieve this information on up- and down-regulated genes with R?

Thanks.

Avoks

geo gene bioconductor • 2.8k views

ADD COMMENT • link updated 10.8 years ago by Biostar 20 • written 13.3 years ago by Avoks ▴ 140

0

Entering edit mode

It seems you asked this question at BioC. Please indicate that you are cross-posting this question to other forums: http://permalink.gmane.org/gmane.science.biology.informatics.conductor/36653

ADD REPLY • link 13.3 years ago by Khader Shameer 18k

0

Entering edit mode

Is there any update about this problem? Thank you.

ADD REPLY • link 10.0 years ago by Zhilong Jia ★ 2.2k

Login before adding your answer.