Hi All
I wish to analyse a sequence by dipeptides and create a histogram out of it. can anyone tell how to perform this?
from lavanya
Grab your favorite programming language, iterate over each sequence position and raise a counter for the specifc dipeptide that you encouter. Hint: dictionaries/hashes are quite handy in such scenarios. Hint2: If you provide more input in your question, the more specific a possible answer gets. I.e. what are your programming skills, what have you done so far to come to a solution (sounds like a homework to me..), what constitutes a dipeptide for you (overlapping/non-overlapping)?
Chris
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
version 2.3.6
hahahaha +1 for the homework :-P