How To Create A Header For A File Generated Via Transdecoder
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10.8 years ago
alok.helix ▴ 120

Can somebody please give me the corresponding Header for the following file generated after the use of Transdecoder??

FA_desaturase        PF00487.19   257 TC00001|m.1          -            384   1.4e-32  113.1  18.0   1   1   1.9e-36   1.4e-32  113.1  12.5     3   250    83   345    81   348 0.87 Fatty acid desaturase
DUF3474              PF11960.3    136 TC00001|m.1          -            384   5.8e-09   36.0   0.1   1   1   1.3e-12   9.9e-09   35.3   0.1    84   132    16    64     6    67 0.85 Domain of unknown function (DUF3474)
ACOX                 PF01756.14   187 TC00006|m.10         -            664   6.2e-56  188.7   0.0   1   1   1.9e-59   9.6e-56  188.1   0.0     1   186   476   657   476   658 0.98 Acyl-CoA oxidase

Which is a better tool transdecoder or interproscan??

transcriptome annotation rnaseq • 1.8k views
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I'm guessing this is the output for HMMER, check their documentation.

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