Entering edit mode
10.0 years ago
Aishwarya Kulkarni
▴
90
I am using the findMotifsGenome.pl module for motif scanning and since my motif is a repeat sequence many of my sequences are not being scanned for since they are thrown out by homer due to masking , what would be the option to unmask the repeat sequences.
If not homer then which would be any other tool which would be good for scanning unmasked sequences?
