Entering edit mode
9.8 years ago
jxiang15
▴
30
Hi there,
I was analyzing some SNPs using the VAI on UCSC Browser and I'm not sure how to interpret the PhastCon output and I've read the tutorials and they weren't that helpful.
I get the following output
rs115302202 chr1:895820 C ... PHC100W=0.0393701;DISTANCE=147
rs115302202 chr1:895820 C ... PHC100W=0.0393701;DISTANCE=1009
rs115302202 chr1:895820 C ... PHC100W=0.0393701;DISTANCE=1189
etc.
Obviously, the PHC100W field is the PhastCons conservation score. However, what is the DISTANCE part?
Thanks