Collection of 5' mRNA ends from human transcriptome

Question

[surka]

Hello!

I was wondering if anyone knew of a downloadable dataset consisting of just the 5' UTR of all (most?) human mRNA. I thought FANTOM5 might have something like it but was unable to locate anything that gives the actual sequences, it tends to give positions within the genome.

Thanks!

Answer 1

[Devon Ryan]

Biomart is probably the simplest solution. That link is a pre-made search that will return the 5' UTR sequence of all annotated human transcripts.

[surka]

Thank you for your answer!