Identify effector/immunity and toxin/antitoxin pairs occuring in bicistronic genes in bacterial genoems
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9.8 years ago
dago ★ 2.8k

In many pathogenic bacteria has been described the presence of toxin/antitoxin system and effector/immunity genes presence as couple of genes in co-transcribed regions.

In some papers they say that the bacterial genomes was screened for the identification of such elements.

However, there is not description of the methods, but "custom Perl/Python script were used".

Has someone idea how to look for such elements in bacterial genomes?

annotation genome virulence pathogenesis • 1.7k views
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