Question

Predicting LincRNA/LncRNA interaction with mRNA/protein of a coding gene

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9.8 years ago

senasplage ▴ 20

I am wondering if there is a tool/method that can compute some sort of interaction score between a LincRNA or LncRNA and an mRNA or a protein of a given gene?

Any suggestions will be much appreciated.

interaction coding lincRNA genome • 5.1k views

ADD COMMENT • link updated 2.6 years ago by Ram 44k • written 9.8 years ago by senasplage ▴ 20

Ram · Answer 1 · 2015-02-28

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9.8 years ago

al3n70rn ▴ 110

Hi Senasplage,

Have a look at catRAPID.

ADD COMMENT • link updated 2.6 years ago by Ram 44k • written 9.8 years ago by al3n70rn ▴ 110

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Thanks, this is definitely what I had in mind.

ADD REPLY • link updated 2.6 years ago by Ram 44k • written 9.8 years ago by senasplage ▴ 20