Entering edit mode
9.7 years ago
dineshtripathy9658
▴
10
how do you distinguish between a monomer and a dimer? i mean without wetlab techniques
how do you distinguish between a monomer and a dimer? i mean without wetlab techniques
Look for REMARK 350 of respective pdb coordinate file .
For example:
http://www.rcsb.org/pdb/files/3O26.pdb REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
http://www.rcsb.org/pdb/files/1R7A.pdb REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500
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the monomer is alone while the dimer is not.
Monomer of what?
protein...monomer of protein