Is there any pipeline for CNV Detection of NGS Data other than Ion Reporter?

Question

[gskbioinfo143]

Please provide information regarding Accurate methodology for CNV Detection of NGS Data other than Iontorrent.

Hope to Hear valuable information

Thanks..

Answer 1

[Floris Brenk]

http://omictools.com/exome-cnv-calling-c181-p1.html

and

http://omictools.com/an-evaluation-of-copy-number-variation-detection-tools-from-whole-exom-s6197.html