Question

fasta to complete genome sequencing

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9.7 years ago

gchn2000 • 0

I have a bam/sam or fasta/fastq file, how to convert it into a complete genome plain sequencing text or gkd formats.

many thanks,

jack

next-gen • 2.5k views

ADD COMMENT • link updated 2.5 years ago by Ram 44k • written 9.7 years ago by gchn2000 • 0

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please define "complete genome plain sequencing text "

ADD REPLY • link 9.7 years ago by Pierre Lindenbaum 164k

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Does he mean the reference genome?

ADD REPLY • link 9.7 years ago by scchess ▴ 640

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Yes, output as a reference genome.

ADD REPLY • link 9.7 years ago by gchn2000 • 0

Ram · Answer 1 · 2015-03-29

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9.7 years ago

fashiondesignrussian ▴ 60

Try Lasergene and SeqSphere software and R

ADD COMMENT • link 9.7 years ago by fashiondesignrussian ▴ 60

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Thanks, could you pls. give name of R package?

ADD REPLY • link updated 2.5 years ago by Ram 44k • written 9.7 years ago by gchn2000 • 0