what R package to calculate pssm sequence profile

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9.6 years ago

m016648 • 0

hi

I search for R package to calculate pssm position sore matrix

pls any help

SNP • 2.7k views

ADD COMMENT • link updated 2.4 years ago by Ram 44k • written 9.6 years ago by m016648 • 0

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pssm position specific score matrix for sequence analysis

ADD REPLY • link updated 2.4 years ago by Ram 44k • written 9.6 years ago by m016648 • 0

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Dear researchers

How I can change multi fastA formats to pssm matrix with psi-blast software?

Thanks a lot

ADD REPLY • link updated 2.4 years ago by Ram 44k • written 5.9 years ago by sh.shafiee2013 • 0

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Well you can go for protr package. It will be helpful for calculate PSSM

ADD REPLY • link updated 2.4 years ago by Ram 44k • written 5.3 years ago by aaravthakur980 • 0

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