Resources for genome-wide maps of transcription factor binding sites?

Question

[Alexander Skates]

I'm looking for resources for transcription factor binding sites, ideally in BED file formats with the coordinates of the beginning and end of each binding site. I know about Cistrome DB (http://cistrome.org/NR_Cistrome/Cistrome.html) and I've also seen hmChIP (http://jilab.biostat.jhsph.edu/database/cgi-bin/hmChIP.pl), but I was hoping for some more.

I'd seen numerous mentions of databases like JASPAR, however whilst this provides maps of the binding sites in BED format as requested, it says nothing about the origin of these maps, e.g. cell type, treatment, etc.

[go4science]

See the publication at https://purr.purdue.edu/publications/1719 for a bed file listing potential TFBSs for hg19

Answer 1

[UnivStudent]

There is also ReMap which merged all ENCODE chip-seq data with public ChIP-seq data from the literature. Paper: http://nar.oxfordjournals.org/content/43/4/e27