Question

Good tool for viewing Multiallelic vcf/bcf files

0

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9.5 years ago

kezcleal ▴ 160

What would be a good tool for viewing vcf files with multiple alleles per site? IGV appears to only show homo/heterozygous with respect to the reference. Does any software display allele frequencies, or the allele spectrum in a user friendly format?

snp sequence • 2.1k views

ADD COMMENT • link updated 23 months ago by Ram 44k • written 9.5 years ago by kezcleal ▴ 160

score 2 · Answer 1 · 2015-06-11

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9.5 years ago

Zaag ▴ 870

http://goldenhelix.com/GenomeBrowse/

ADD COMMENT • link 9.5 years ago by Zaag ▴ 870