How to analysis lncRNA array results if sample number is limited

Question

[357150421]

There are only 3 sample for two phonotype and one control, all are tested by Agilent RNA array, what I can get is only expressed profile of mRNA and lncRNA.

What I have done now is just analysis different expressed mRNA through GO and kegg. Could anyone tell me how to conduct downstream analysis(especially mRNA and lncRNA association study or lncRNA enrichment analysis).

Answer 1

[Antonio R. Franco]

I would say that a search in Google with "lncRNA pipeline" will result in many different papers, programs and services that can be useful for you

Hope this will be useful

[357150421]

It's helpful, thanks