Question

Protein Feature Ontology List Of Terms Needed

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13.0 years ago

John Jackson ▴ 10

Anyone know where I can find a complete list of Protein Feature Ontology terms? I want the feature terms listed in an indent hierarchy that is completey expanded so all of the terms are showing.

protein feature sequence • 2.4k views

ADD COMMENT • link updated 13.0 years ago by Khader Shameer 18k • written 13.0 years ago by John Jackson ▴ 10

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What protein features are you thinking of here? Beta sheet, loop, etc? If about functionality, the Gene Ontology will got you far probably.

ADD REPLY • link 13.0 years ago by Egon Willighagen 5.4k

score 2 · Answer 1 · 2011-12-18

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13.0 years ago

Pierre Lindenbaum 164k

Search for your ontology in the bioportal: http://bioportal.bioontology.org/ . The ontologies are displayed using a tree.

ADD COMMENT • link 13.0 years ago by Pierre Lindenbaum 164k

score 0 · Answer 2 · 2012-02-23

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12.8 years ago

Khader Shameer 18k

Have you checked Protein Feature Ontology terms using Ontology Lookup Service maintained by EBI.

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I can see the full set of terms in PFO there.

ADD COMMENT • link 12.8 years ago by Khader Shameer 18k