Swiss-Prot > Ensembl 1:many

Question

[cdsouthan]

I was mapping some GPCRs from UniProt > Ensembl using Biomart

So what's the explanation for below? (and others)

Q9UBS5    ENSG00000237112
Q9UBS5    ENSG00000206511
Q9UBS5    ENSG00000232569
Q9UBS5    ENSG00000237051
Q9UBS5    ENSG00000204681
Q9UBS5    ENSG00000232632
Q9UBS5    ENSG00000206466
Q9UBY5    ENSG00000171517

Answer 1

[Emily]

The genes are on haplotypes on the MHC locus.

[cdsouthan]

Ta (useful hap video BTW)

But HGNC and Entrez Gene only give ENSG00000204681 from primary assembly

So from 20,203 human Swiss-Prots how many are primary assembly singletons but multimappers in haplotypes or patches?

Would be good to have this as a select option in BioMart and UniProt x-refs?