Blast Tabular to XML
1
0
Entering edit mode
9.2 years ago
moranr ▴ 290

Hi,

I have a rather large Blast completed, with the results in tabular text format. I need to generate the results in xml format to use with software. I know I can specify this in the blasting options, but to redo the blast is a lot of computation power that I wish not to 'waste' if possible.

Thanks

xml blast • 3.0k views
ADD COMMENT
1
Entering edit mode
9.2 years ago
michael.ante ★ 3.9k

Try this one:A: Convert Blast Output Into Blast-Xml

ADD COMMENT
1
Entering edit mode

Generating authentic blast xml output from tabular output is impossible because some of the information, like e.g. the actual alignments, is not present in the latter.

ADD REPLY
0
Entering edit mode

This comment is the correct answer to my question. Thanks.

ADD REPLY

Login before adding your answer.

Traffic: 2116 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6