question about protein GPI anchor site prediction

Question

[haust]

Hello everyone,

Does anyone who have used the software GPI-SOM to predict protein anchor site?

I used this software in command line and it was running normally, when I called it in a perl script ,errors appeared with Died at ./mapfill2A line 4, it seems that the software should run in the directory installed?

Do you have some suggests or other software,I know another software DGPI but I can't open the website?

Thank you very much!

[sdsilvapereira]

Hi! Have you found a solution? I couldn't use GPI-SOM because the library it requires seems to no longer be maintained... I am now trying to install ModPred, but I can't do it either...

Answer 1

[natasha.sernova]

Many years ago it was a topic of my work in Swiss-Prot.

Hopefully it may be helpful.

http://www.mpb.unige.ch/reports/rep_Natalia_Sernova.pdf