Scraping Therapeutic Antibody Database
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9.1 years ago

Good afternoon.

Has anybody experienced scraping the http://tabs.craic.com database? I'm trying to use Python for that purpose, but my code won't work:

import requests
from requests import HTTPBasicAuth

page = requests.get("http://tabs.craic.com/sequences/1.html", auth=HTTPBasicAuth("my_name", "my_passw"))
print page.text

I'm legal user, i.e I've access token and all the rights, but the page I'm trying to access is not what I wanted. Is there something wrong with my code?

scraping Python TABS • 2.5k views
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http://tabs.craic.com/static_pages/3 "You may NOT transfer data from the Service using automated scripts or other automated data transfer software with express written permission from Craic Computing."

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The wording of that clause suggests you can transfer data as long as you don't have written permission. I wouldn't do it, but...that is a bad typo.

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4.5 years ago
liangj • 0

I suppose commercial databases just don't welcome your scraping. It could even be illegal.

Try these

Thera-SAbDab
http://opig.stats.ox.ac.uk/webapps/newsabdab/therasabdab/search/ free NIH https://antibodies.cancer.gov/browse free Tabs
https://tabs.craic.com paid/trial IMGT
http://www.imgt.org/mAb-DB/ free Kabat
http://www.abysis.org/ free AdisInsight http://www.adisinsight.com/ paid

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