Autodock error while convertin pdbqt files
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9.0 years ago
arniie.me • 0

Hi,

Well, I was using ADT to convert .pdb files to .pdbqt .The following error popped up, please help me with it

Python 2.5.6 (r256:88840, Nov  6 2012, 15:29:26)
[GCC 4.1.2 20061115 (prerelease) (Debian 4.1.1-21)] on linux2
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    ****************************************************************
    Personal firewall software may warn about the connection IDLE
    makes to its subprocess using this computer's internal loopback
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    interface and no data is sent to or received from the Internet.
    ****************************************************************

IDLE 1.2.6      ==== No Subprocess ====
>>> Exception in Tkinter callback
Traceback (most recent call last):
  File "/home/arnab/MGLTools-1.5.6/lib/python2.5/lib-tk/Tkinter.py", line 1414, in __call__
    return self.func(*args)
  File "/home/arnab/MGLTools-1.5.6/MGLToolsPckgs/AutoDockTools/autogpfCommands.py", line 4479, in chooseMolecule_cb
    mol = self.chooser.getMolSet()
  File "/home/arnab/MGLTools-1.5.6/MGLToolsPckgs/Pmv/guiTools.py", line 178, in getMolSet
    if self.mode=='single': return mols[0]
  File "/home/arnab/MGLTools-1.5.6/lib/python2.5/UserList.py", line 28, in __getitem__
    def __getitem__(self, i): return self.data[i]
IndexError: list index out of range
python • 2.7k views
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