Question

Diamond writting error

0

Entering edit mode

9.0 years ago

zhenghanl1020 • 0

When I used diamond to create a DB, I always got the problem:

Error: Error writing file kegg_gene.dmnd (44631864/4040)

Has anyone know how to correct it?

blast • 2.2k views

ADD COMMENT • link updated 2.3 years ago by Ram 44k • written 9.0 years ago by zhenghanl1020 • 0

1

Entering edit mode

what is diamond ?

ADD REPLY • link 9.0 years ago by Pierre Lindenbaum 164k

0

Entering edit mode

ADD REPLY • link updated 5.0 years ago by Ram 44k • written 9.0 years ago by IsmailM ▴ 110

score 1 · Answer 1 · 2015-11-17

1

Entering edit mode

9.0 years ago

Chris Fields ★ 2.2k

Maybe out of disk space? Or on a cluster?

See this issue on the DIAMOND GitHub repo.

(I have used DIAMOND on a shared file system w/o problems, but that's locally using GPFS)

ADD COMMENT • link 9.0 years ago by Chris Fields ★ 2.2k

0

Entering edit mode

Thanks a lot for your reply！

ADD REPLY • link 9.0 years ago by zhenghanl1020 • 0