what the "mean original quality" and "mean quality" mean in the pdf output of MeanQualityByCycle tools of picard
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9.0 years ago
zengxi.hada ▴ 90

Dear all,

I use picard tool MeanQualityByCycle to plot the quality distribution of bases. I wonder what the mean of "cycle", and what the difference of "mean original quality" and "mean quality"? Anyone can help me? Thank you.

Best,
Michael

next-gen alignment picard • 1.6k views
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