Entering edit mode
9.1 years ago
Bogdan
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1.4k
Dear all,
as I have just started working in the field of cancer genomics, I was wondering if anyone could recommend a good resource (possibly a LINUX shell template) for linking GATK and MUTECT in order to call somatic mutations in cancer samples ? many thanks,
-- bogdan
Thanks Sean. Dear all, could I find some TEMPLATE CODE that will allow running MUTECT on each chromosome (or chromosome fragment)?
You'll need to read the documentation.