identification of genes from contigs using reference genome

Question

[sharma_tina189059]

Hi all,

I have 1500 contigs of eukaryotes and a reference draft sequences. I need to find out polyketides genes in my contigs for further analysis. Please suggest me suitable pipeline.

[GouthamAtla]

You may need to elaborate your question. Are trying to annotate your contigs or do you already have the gene sequence and trying to find out the coordinates from the contigs, etc etc. Then you can expect some answers.