how to generate ptt file

Question

[Arko]

Hi all,

I just want to know how to make ptt file from own draft genomes.

There are .faa, .ffn, .fna, .gbk, gff, tbl, .sqn files generated by the Prokka annotation program.

Can I make ptt (protein table) file from these files?

I tried https://lfz.corefacility.ca/gbk2ptt/ for generating ptt from gbk, but it seems not to be useful for draft genomes.

What is the easiest way? Any help is appreciated.

Answer 1

[Sukhi Singh]

Might be of help What Is A .Ptt File And How It Is Created?, especially this Perl module

http://doc.bioperl.org/bioperl-live/Bio/FeatureIO/ptt.html