Phylogeny from Genotype Count data using MEGA

Question

[hellbio]

Hi,

I have genotype data in a matrix which has values from 1-5 as shown below:

      CNV1    CNV2    CNV3    CNV4
S1    2       3       2       2
S2    1       2       4       2
S3    0       2       1       2
S4    5       2       3       2
S5    1       2       2       2

Could someone suggest how this data can be input to MEGA or anyother phylogeny software calculate distance matrix and construct NJ tree.

[caroline.pont]

Hi, I have exactely the same question... did you find the way to do that? (I have a .vcf format)