Is it any website that allows you to test your Bioperl code???

Question

[Andrea]

Is it any website that allows you to test your Bioperl code??? (failing to successfully install bioperl on my windows system)

[Dan D]

χαιρετίσματα!

There's tryperl.pl but it doesn't have bioperl as an available module.

What's the specific problem you're having with the bioperl installation?

[Andrea]

Γεια σου φίλε! I follow everything step by step with perl 5.20.2.2002 (before I tried also with 5.20.3.2003) from https://github.com/bioperl/bioperl-live/blob/master/undefined but still no good result. I used 'force install' but still I get the error when try run a script :Can't locate Bioperl.pm in @INC (you may need to install the Bioperl module) (@INC contains: C:/Perl64/site/lib C:/Perl64/lib .) at c3.pl line 5..

[Dan D]

If you use Strawberry Perl, then you can install bioperl using cpan.

[Andrea]

Strawberry Perl had absolutely no problem installing bioperl, Thanks!

[Dan D]

Great news! Package managers like CPAN are really useful. Thanks for following up.

[Michael]

You could install BioLinux in a virtual box and run your script there, if it is just for testing.

[microfuge]

Just wondering that would docker (https://en.wikipedia.org/wiki/Docker_(software) ) would be a good option for this ?

Answer 1

[Bioaln]

I highly doubt it. I suggest you try with Padre IDE and install BioPerl from there, if everything is o.k., it will work like a charm.

Answer 2

[jaypatel.ani]

It can be done easily. get 60 days vps trail at : https://www.vultr.com/freetrial/ install https://www.vultr.com/docs/setup-openbsd and run : pkg_add bioperl

its very easy and smooth.

Thanks, Jay