Entering edit mode
8.7 years ago
Eva_Maria
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190
Hai every one
I did a transcriptome assembly with tophat and followed by cufflinks for Pseudomonas aeruginosa. After processing gtf file got 38 loci, Is it a good number? How many loci can expect from cufflinks output for bacterial species?
Really, I don't know, but these guys in this paper are seeing around 3000 TSS