Error in Commands
0
0
Entering edit mode
8.6 years ago
786 ▴ 50

I just couldn't understand what is the error in this command please help me out....

fit = lmFit(gse21340eset, design_gse21340)

when I run it I got this error

Coefficients not estimable: control.FH control.noFH rep.control.FH T2D.FH 
Error in lm.fit(design, t(M)) : 0 (non-NA) cases

what does this error means and where is error in above mentioned command??

R limma affy • 1.7k views
ADD COMMENT
0
Entering edit mode

What does design_gse21340 look like? It has some excess columns.

ADD REPLY
0
Entering edit mode

yes it has excess columns

ADD REPLY
0
Entering edit mode

can you please let me know what does this command means?

ADD REPLY
0
Entering edit mode

What does what command mean?

ADD REPLY
0
Entering edit mode
fit = lmFit(gse21340eset, design_gse21340)

this one..

ADD REPLY
1
Entering edit mode

In R, the following will tell you everything you need to know about the comment:

?lmFit
ADD REPLY
0
Entering edit mode

what will let me know everything?

ADD REPLY
0
Entering edit mode

?lmFit

ADD REPLY
0
Entering edit mode

How can I learn it quickly any shortcut if u have any idea??

ADD REPLY
0
Entering edit mode

Run the command as typed above by @Devon and @decosterwouter while in R. That is how you will get inline help for that command.

ADD REPLY
0
Entering edit mode

Thanx alot fr your help :)

ADD REPLY

Login before adding your answer.

Traffic: 2431 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6