select chr22 lines from Ensembl GTF file
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8.6 years ago
debitboro ▴ 270

Hi all,

I hope I can find what I'm looking for, so I just want to extract the lines that match to chromosome 22 from an Ensembl gtf file.

Any script or command to to this ?

Thanks for all

gtf files chr22.gtf RNA-Seq Ensembl • 1.8k views
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8.6 years ago

Something like:

awk '{if($1 == "22") print $0}' input.gtf > filtered.gtf

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Thank you Devon for your quick, short, and useful answer

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