Entering edit mode
8.7 years ago
espop23
▴
60
Hello,
I am trying to join multiple paired end-reads in qiime. Essentially, I have a folder called teaser that has all my forward and end reads, which all start with sample and then have numbered identifiers. I have used the following code:
$ multiple_join_paired_ends.py -i teaser/sample -o joined*
But get errors: ValueError: Invalid filename found for splitting on input for file
Is there something I have to add to my script in the terminal to make it work?
Thank you!
multiple_join_paired_ends.py -i teaser/ -o joined
Not sure, why you've sample in
teaser
I'm assuming joined output folder exists. If not, create it, and try.