How to get phylum, class etc taxonomic ids from taxid?

Question

[crespialba]

I have a list of taxids that looks like this:

1204725
2162
1300163
420247

I am looking to get a file with taxonomic ids in order from the taxids above:

kingdom_id      phylum_id       class_id        order_id        family_id       genus_id        species_id

I am using the package "ete3". I use the tool ete-ncbiquery that tells you the lineage from the ids above. (I run it from my linux laptop with the command below)

ete3 ncbiquery --search 1204725 2162 13000163 420247 --info

The result looks like this:

# Taxid Sci.Name    Rank    Named Lineage   Taxid Lineage
2162    Methanobacterium formicicum species root,cellular organisms,Archaea,Euryarchaeota,Methanobacteria,Methanobacteriales,Methanobacteriaceae,Methanobacterium,Methanobacterium formicicum   1,131567,2157,28890,183925,2158,2159,2160,2162
1204725 Methanobacterium formicicum DSM 3637    no rank root,cellular organisms,Archaea,Euryarchaeota,Methanobacteria,Methanobacteriales,Methanobacteriaceae,Methanobacterium,Methanobacterium formicicum,Methanobacterium formicicum DSM 3637  1,131567,2157,28890,183925,2158,2159,2160,2162,1204725
420247  Methanobrevibacter smithii ATCC 35061   no rank root,cellular organisms,Archaea,Euryarchaeota,Methanobacteria,Methanobacteriales,Methanobacteriaceae,Methanobrevibacter,Methanobrevibacter smithii,Methanobrevibacter smithii ATCC 350611,131567,2157,28890,183925,2158,2159,2172,2173,420247

I have no idea which items (IDS) correspond to what I am looking for (if any)

[piet]

Obtain full taxonomic hierarchy from multiple species names

[jhc]

some answers also here: http://stackoverflow.com/a/36517712

Answer 1

[crespialba]

This question was answered in stackoverflow http://stackoverflow.com/questions/36503042/how-to-get-taxonomic-specific-ids-for-kingdom-phylum-class-order-family-gen