Question

motif detection analysis

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8.5 years ago

bioinfo ▴ 60

Hi I have collected a list of informative genes. I want to do motif detection. What input has to give for FANMOD software??

gene • 1.3k views

ADD COMMENT • link 8.5 years ago by bioinfo ▴ 60

score 2 · Answer 1 · 2016-06-13

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8.5 years ago

shaun ▴ 80

FANMOD is for detecting network motifs, I guess you would like to detect sequence motifs. You better use MEME suite in which case just give it the DNA/protein sequence of you genes/promoters (depending on your interest).

ADD COMMENT • link 8.5 years ago by shaun ▴ 80