Retrieving gene names from list of mRNA accession IDs
0
0
Entering edit mode
8.4 years ago
rse ▴ 100

I have a list of mRNA accession IDs. I want to get the gene names for these IDs. Can anyone suggest how to do it ? I do it by Ensembl Biomart but something other than this, more automated?

next-gen • 4.0k views
ADD COMMENT
3
Entering edit mode
ADD REPLY
0
Entering edit mode

Thanks a lot for the suggestions

ADD REPLY
1
Entering edit mode

Hello, if you know some Perl, maybe the BioMart Perl API might be useful for you.

ADD REPLY
0
Entering edit mode

Bionetdb is a helpful tool for ID conversions

https://biodbnet-abcc.ncifcrf.gov/db/db2db.php

ADD REPLY

Login before adding your answer.

Traffic: 1843 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6