any papers/methods on inferring whole genome doubling/non-reciprocal translocations from WGS data

Question

[Ming Tommy Tang]

Does anyone know papers or methods on inferring whole genome doubling/non-reciprocal translocations from WGS data?

Thank you very much!

Tommy

Answer 1

[poisonAlien]

Genome Doublings can be inferred from copy number data using Absolute. See this paper ..

[Ming Tommy Tang]

thanks for the paper. I am new to this. I love your maftools by the way :)

[poisonAlien]

haha.. Thank you.. :)