calculate Ka Ks from SNP table
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8.4 years ago

Dear all,

I have two subset with their inter-subset SNP comparison as below

enter image description here .....

I would like to calculate the Ka (nonsynonymous substitution rate) and Ks (synonymous substitution rate) Would anyone know any packages or methods to deal with this issue?

RNA-Seq snp • 2.1k views
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