Width setting in r
1
0
Entering edit mode
8.4 years ago
ashamscsoft ▴ 20

Anyone please help me. I want to increase the width of workspace in R. When i give the whole gene while running it says reached maximum and omitted 36247 entries. Kindly anyone help.

sequence • 1.2k views
ADD COMMENT
0
Entering edit mode
8.4 years ago
options(max.print=1000000) # or some other number

Of course I'm not sure why you want to print so many lines to the screen...

ADD COMMENT
0
Entering edit mode

because the sequence is upto 464kb

ADD REPLY
0
Entering edit mode

And you want that printed to the screen? Are you really planning on scrolling through that? Just because it isn't printed to screen doesn't mean you're not storing it.

ADD REPLY
0
Entering edit mode

yes of course. I know it will get stored but we want to see the result rite. While seeing the stored results, it s coming with above said error so only.

ADD REPLY
0
Entering edit mode

I think you may be better off writing the data to a temporary file and using a dedicated text editor to view it.

ADD REPLY
0
Entering edit mode

I need to split the sequence to codon for that atleast i need to do it anyway. It cannot be done manually.

ADD REPLY
1
Entering edit mode

Get your codon logic working for a subset of your sequence, and then implement it on the larger sequence. The algorithm, like any other algorithm at this level, should be independent of the data size difference - we are not dealing with even megabytes of data, after all.

ADD REPLY

Login before adding your answer.

Traffic: 2648 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6