Novel miRNA target gene prediction tool?

Question

[bbmisraccb]

Hello all,

What tools and resources available to find the "target" gene list for a "list of predicted (100s) miRNAs" generated from a novel miRNA detection workflow in a novel biological system. Do not have miRBase or other DBs equivalence (and hence novel)!

Tools do exist to predict one by one, but how to do so in batch? Any web server or DB or tool to do it in a "batch run more" for miRNA target prediction ?

Thanks for advice in advance, Biswa

Answer 1

[Prasad]

Target Tools check the link, has many tools. You can run through multiple tools and den combine the result (common targets from different tools as potential target

[bbmisraccb]

Thanks a lot. Seems useful. : )